WebbPlants produce a vast diversity of specialized metabolites, which play important roles in the interactions with their microbiome, as well as with animals and other ... WebbMedema MH, Trefzer A, Kovalchuk A, van den Berg M, Müller U, Heijne W, Wu L, Alam MT, Ronning CM, Nierman WC, Bovenberg RA, Breitling R, Takano E (2010) The sequence of a 1.8-mb bacterial linear plasmid reveals a rich evolutionary reservoir of secondary metabolic pathways. Genome Biology and Evolution 2: 212-224.

Schematic representation of the cluster detection algorithm.

WebbWhen operating through our webinterface, PhytoClust users can mine a genome either based on a list of known cluster types or by defining new cluster rules. Moreover, for … WebbPhytoClust MatchWeiz CoExpNetViz MetaboQC. Department of Plant and Environmental Sciences. The Aharoni Lab togaf domain architecture

[PDF] The PhytoClust tool for metabolic gene clusters discovery in ...

WebbMarnix Medema - Home. Thank you for visiting my web page. I am a professor at Wageningen University, The Netherlands. On this website, you can find more information about me, my research interests, my publications and my software. WebbThe existence of Metabolic Gene Clusters (MGCs) in plant genomes has recently raised increased interest. Thus far, MGCs were commonly identified for pathways of … Webb1 feb. 2024 · The straightforward method to characterize a putative plant CYP from a BGC is to insert the CYP cDNA into a yeast expression vector and to co-express it with a plant-derived cytochrome P450 reductase (CPR) in yeast for in vitro microsomal or in vivo tests. The CPR is usually co-expressed with the candidate CYP to transfer electrons from … people named brandon